Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma

O. Francino; D. Pérez; J. Viñes; R. Fonticoba; S. Madroñero; G. Meroni; P. Martino; S. Martínez; A. Cusco; N. Fàbregas; L. Migura-García; L. Ferrer

doi:10.1128/MRA.00152-21

Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma

O. Francino, D. Pérez, J. Viñes, R. Fonticoba, S. Madroñero, G. Meroni, P. Martino, S. Martínez, A. Cusco, N. Fàbregas, L. Migura-García, L. Ferrer

Research output: Indexed journal article › Article › peer-review

3 Citations (Scopus)

Abstract

We have de novo assembled and polished 61 Staphylococcus pseudintermedius genome sequences with Nanopore-only long reads. Completeness was 99.25%. The average genome size was 2.70 Mbp, comprising 2,506 coding sequences, 19 complete rRNAs, 56 to 59 tRNAs, and 4 noncoding RNAs (ncRNAs), as well as CRISPR arrays.

Original language	English
Article number	e00152-21
Journal	Microbiology Resource Announcements
Volume	10
Issue number	16
DOIs	https://doi.org/10.1128/MRA.00152-21
Publication status	Published - 22 Apr 2021
Externally published	Yes

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10.1128/MRA.00152-21

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Francino, O., Pérez, D., Viñes, J., Fonticoba, R., Madroñero, S., Meroni, G., Martino, P., Martínez, S., Cusco, A., Fàbregas, N., Migura-García, L., & Ferrer, L. (2021). Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma. Microbiology Resource Announcements, 10(16), Article e00152-21. https://doi.org/10.1128/MRA.00152-21

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abstract = "We have de novo assembled and polished 61 Staphylococcus pseudintermedius genome sequences with Nanopore-only long reads. Completeness was 99.25%. The average genome size was 2.70 Mbp, comprising 2,506 coding sequences, 19 complete rRNAs, 56 to 59 tRNAs, and 4 noncoding RNAs (ncRNAs), as well as CRISPR arrays.",

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Francino, O, Pérez, D, Viñes, J, Fonticoba, R, Madroñero, S, Meroni, G, Martino, P, Martínez, S, Cusco, A, Fàbregas, N, Migura-García, L & Ferrer, L 2021, 'Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma', Microbiology Resource Announcements, vol. 10, no. 16, e00152-21. https://doi.org/10.1128/MRA.00152-21

TY - JOUR

T1 - Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma

AU - Francino, O.

AU - Pérez, D.

AU - Viñes, J.

AU - Fonticoba, R.

AU - Madroñero, S.

AU - Meroni, G.

AU - Martino, P.

AU - Martínez, S.

AU - Cusco, A.

AU - Fàbregas, N.

AU - Migura-García, L.

AU - Ferrer, L.

PY - 2021/4/22

Y1 - 2021/4/22

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AB - We have de novo assembled and polished 61 Staphylococcus pseudintermedius genome sequences with Nanopore-only long reads. Completeness was 99.25%. The average genome size was 2.70 Mbp, comprising 2,506 coding sequences, 19 complete rRNAs, 56 to 59 tRNAs, and 4 noncoding RNAs (ncRNAs), as well as CRISPR arrays.

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U2 - 10.1128/MRA.00152-21

DO - 10.1128/MRA.00152-21

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VL - 10

JO - Microbiology Resource Announcements

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ER -

Whole-Genome Sequencing and De Novo Assembly of 61 Staphylococcus pseudintermedius Isolates from Healthy Dogs and Dogs with Pyoderma

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